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SRX1850480: GSM2203000: Female Melanogaster CLAMP input Replicate 1; Drosophila melanogaster; ChIP-Seq
1 ILLUMINA (Illumina HiSeq 2500) run: 25.2M spots, 2.5G bases, 1.3Gb downloads

Submitted by: NCBI (GEO)
Study: Expansion of GA dinucleotide repeats increases the density of CLAMP binding sites on the X-chromosome to promote Drosophila dosage compensation [ChIP-Seq]
PRJNA325925 • SRP076672 • All experiments • All runs
show Abstracthide Abstract
ChIP-seq was performed to compare binding the genome-wide binding profile of the CLAMP transcription factor in two different Drosophila species. Overall design: ChIP seq experiments compare the binding profile of CLAMP in female larvae to identify conservation of its binding sequence.
Sample: Female Melanogaster CLAMP input Replicate 1
SAMN05255838 • SRS1508218 • All experiments • All runs
Organism: Drosophila melanogaster
Library:
Instrument: Illumina HiSeq 2500
Strategy: ChIP-Seq
Source: GENOMIC
Selection: ChIP
Layout: SINGLE
Construction protocol: Standard ChIP seq protocol - larvae were homogenized in liquid nitrogen followed by lysis and sonication, chromatin was immunoprecipitated with CLAMP antibody. ChIP-seq libraries were prepared with the illumina TruSeq DNA Prep kit
Experiment attributes:
GEO Accession: GSM2203000
Links:
Runs: 1 run, 25.2M spots, 2.5G bases, 1.3Gb
Run# of Spots# of BasesSizePublished
SRR367503725,208,9952.5G1.3Gb2016-07-18

ID:
2644395

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